BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB013D03SP1|AL426506
(842 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig478 1663 0.0
>3x_Contig478
Length = 3300
Score = 1663 bits (839), Expect = 0.0
Identities = 841/842 (99%)
Strand = Plus / Plus
Query: 1 gatctgtctttaatccattcaattcttccaaaatcatttaaatcgggcaccaactcaggg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2114 gatctgtctttaatccattcaattcttccaaaatcatttaaatcgggcaccaactcaggg 2173
Query: 61 tcagatttagcgttgaatgccgctgcttgttcagtggaatttggcatgattcttctctta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2174 tcagatttagcgttgaatgccgctgcttgttcagtggaatttggcatgattcttctctta 2233
Query: 121 taatatctcattctctctttgaagtcaaattggatatcatccttcaattgttgaaatatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2234 taatatctcattctctctttgaagtcaaattggatatcatccttcaattgttgaaatatt 2293
Query: 181 tcattgttagatatatcttcctgtggcgaaggaactgtaccaccatgagtcggcacagcg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2294 tcattgttagatatatcttcctgtggcgaaggaactgtaccaccatgagtcggcacagcg 2353
Query: 241 accaaattggggacttgttgcggaaatatgtcatagttcggaccaatcttgatgaatgag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2354 accaaattggggacttgttgcggaaatatgtcatagttcggaccaatcttgatgaatgag 2413
Query: 301 gacccaggatgaataatgatggaatcaagttcatcatcttctattgcattggaatcagcc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2414 gacccaggatgaataatgatggaatcaagttcatcatcttctattgcattggaatcagcc 2473
Query: 361 atgttatcatcatccaatgctggcgtcccaattccggcagcgggagcagaacttgagcca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2474 atgttatcatcatccaatgctggcgtcccaattccggcagcgggagcagaacttgagcca 2533
Query: 421 cctgtttggccttgttgtctcaaatgtttcctttctctcatatagaagatctgatcatcg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2534 cctgtttggccttgttgtctcaaatgtttcctttctctcatatagaagatctgatcatcg 2593
Query: 481 ttcttcaaataattggaagaataattcttttggttgatgactgacaccggtttcaaagta 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2594 ttcttcaaataattggaagaataattcttttggttgatgactgacaccggtttcaaagta 2653
Query: 541 attggttgagcaatatgttcattttcttgtctttcgataccgataatctttaactttttg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2654 attggttgagcaatatgttcattttcttgtctttcgataccgataatctttaactttttg 2713
Query: 601 gcgaactcttcagctgctttaattcttcctagacgacgtttctcaagcaaatgctgtggg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2714 gcgaactcttcagctgctttaattcttcctagacgacgtttctcaagcaaatgctgtggg 2773
Query: 661 accttcttcgatggnatatcctttgagatcttcccatcggaccccagcagaggttcctta 720
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2774 accttcttcgatggtatatcctttgagatcttcccatcggaccccagcagaggttcctta 2833
Query: 721 gaaggctccttagaaggttctttagagggcgattcggtgggatctatttcggtgtccatt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2834 gaaggctccttagaaggttctttagagggcgattcggtgggatctatttcggtgtccatt 2893
Query: 781 ggggattggcttgtcagagatggaggttgctggttcaactgcaagctataattggaatga 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2894 ggggattggcttgtcagagatggaggttgctggttcaactgcaagctataattggaatga 2953
Query: 841 gt 842
||
Sbjct: 2954 gt 2955
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7406
Number of Sequences: 1807
Number of extensions: 7406
Number of successful extensions: 60
Number of sequences better than 1.0e-20: 1
length of query: 842
length of database: 10,358,551
effective HSP length: 16
effective length of query: 826
effective length of database: 10,329,639
effective search space: 8532281814
effective search space used: 8532281814
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)